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Intermediate 9 min read

What Is a Stem Cell Transplant?

A plain-language explanation of stem cell (bone marrow) transplants for cancer, based on National Cancer Institute resources.

NCI source:NCI last reviewed 2023-10-05

Review status: AI-assisted, source checked. Not reviewed by a clinician. How we check pages

The short answer

Stem cell transplants restore blood-forming stem cells in people who have had theirs destroyed by high doses of chemotherapy or radiation therapy. They are most often used for blood cancers. The transplant usually does not fight cancer directly; instead, it rebuilds your body's ability to make new blood cells after strong treatment.

  • Stem cell transplants restore blood-forming stem cells destroyed by high-dose chemo or radiation.

  • They are most often used for blood cancers like leukemia, lymphoma, and multiple myeloma.

  • They usually do not fight cancer directly, but rebuild your ability to make blood cells.

  • Cells can come from you (autologous), a donor (allogeneic), or an identical twin (syngeneic).

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The simple version

High doses of chemotherapy or radiation therapy destroy blood stem cells. A stem cell transplant restores them. Those high doses are used to treat certain cancers, blood disorders, and autoimmune disorders. Transplants may also be called bone marrow transplants or peripheral blood stem cell transplants.

Blood-forming stem cells are vital because they grow into different types of blood cells:

  • white blood cells, which are part of your immune system and help fight infection
  • red blood cells, which carry oxygen throughout your body
  • platelets, which help the blood clot and prevent bleeding

A stem cell transplant rebuilds your supply of blood-forming stem cells after strong treatment.

Which cancers it treats

Stem cell transplants are used most often for cancers that affect blood cells. These include leukemia, lymphoma, multiple myeloma, and myelodysplastic syndromes. They may also be used for neuroblastoma, Ewing sarcoma, germ cell tumors, and testicular cancer. They are used for brain tumors that have come back in children. And they are used for other blood disorders, such as aplastic anemia and sickle cell disease, and for autoimmune diseases.

How it works against cancer

Stem cell transplants do not usually fight cancer directly. Very high doses of chemotherapy, and maybe radiation therapy, destroy the cancer cells. The transplant then restores your body's ability to make new blood cells.

But in leukemia, the transplant may fight cancer directly. This happens through an effect called graft-versus-tumor, or graft-versus-leukemia. It can occur after transplants that use stem cells from a donor. White blood cells from your donor, called the graft, attack any cancer cells left in your body. That improves the chances of success.

The types of transplant

In a stem cell transplant, you receive healthy blood-forming stem cells through a needle in your vein. Most transplanted stem cells come from the bloodstream. That is called a peripheral blood stem cell transplant. They can also come from the bone marrow, in a bone marrow transplant, or from umbilical cord blood, in a cord blood transplant. Once they enter your bloodstream, the stem cells travel to the bone marrow. There they take the place of the cells destroyed by treatment.

Transplants can be:

  • autologous — the stem cells come from you, the person with cancer
  • allogeneic — the stem cells come from someone else, who may be a blood relative or an unrelated but closely matched donor
  • syngeneic — the stem cells come from your identical twin

With autologous transplants, the cells will match. But there is a small risk that cancer cells will be transplanted too. With allogeneic transplants, the cells must match closely enough. Otherwise your immune system will see them as foreign and destroy them. There are two special forms. Mini-transplants are allogeneic transplants that use lower doses of treatment. Tandem transplants are autologous transplants with two rounds of high-dose chemotherapy and two transplants.

How donor cells are matched

Are a donor's stem cells a match? To find out, they are tested for their HLAs, or human leukocyte antigens. These are sets of protein markers on most cells in your body. Each person has a different set. The more HLAs you and the donor share, the better the chance your body will accept the donor's stem cells. Most often, the best match for an allogeneic transplant is a brother or sister.

A good HLA match improves the chance that your body accepts donor cells.

Side effects

The high doses of cancer treatment before a transplant can cause bleeding. They also raise the risk of infection, and leave you feeling tired and worn out.

Short-term problems may include nausea, vomiting, fatigue, loss of appetite, mouth sores, hair loss, and skin reactions. Long-term problems may include infertility, cataracts, and new secondary cancers. They may also include damage to the liver, kidneys, lungs, or heart, and bone and muscle weakness. Talk with your doctor or nurse about which side effects you might have, and what to do about them.

One symptom cannot wait. During the weeks when your blood counts are lowest, a fever is an emergency, not a wait-and-see. CDC treats a temperature of 100.4°F (38°C) or higher as a sign of infection during cancer treatment. One reading is enough. Infections in this period can be life threatening. If your team gave you a lower number, use theirs. Talk with the transplant team before taking any medicine for a fever, even acetaminophen (Tylenol). NCI says it can hide signs of a more serious problem. The low-count period is covered in more detail in infection and neutropenia.

Graft-versus-host disease

If you have an allogeneic transplant, you might develop a serious problem called graft-versus-host disease. White blood cells from your donor, the graft, may see cells in your body, the host, as foreign. They then attack them, damaging the skin, liver, intestines, and other organs.

It can be acute, within the first 3 months after transplant, or chronic, at 3 months or later. It can be treated with steroids, or with other drugs that suppress your immune system. The risk can be lowered in several ways:

  • Using a closer donor match
  • Giving drugs that suppress the immune system
  • Treating the donated stem cells to remove the T cells (a type of white blood cell) that cause it. This approach is called T-cell depletion.

What to expect

How long it takes. A transplant can take a few months to complete. It begins with high doses of chemotherapy, and maybe radiation, for a week or two. Then come a few days of rest. Next you receive the stem cells through an IV catheter, on a day often called "day zero." This is like a blood transfusion and takes 1 to 5 hours. Then comes the recovery phase, when doctors check your blood counts often. Your counts return to normal first. Full immune recovery takes longer: several months for autologous transplants, and 1 to 2 years for allogeneic or syngeneic transplants. If nothing goes wrong, you can usually go home about 100 days after receiving donor stem cells.

Where you go. For an allogeneic transplant, you will go to a hospital with a specialized transplant center. Transplants require long stays at these centers. If you do not live nearby, you may need to stay in a hotel or apartment when you are not in the hospital. Travel and housing costs are a real part of the decision. Ask the center what help it offers before you agree.

Working. Whether you can work depends on your job. The process can take many months, with time in and out of the hospital. Expect more tiredness, and frequent hospital visits after discharge. If your job allows, you may want to arrange to work remotely part-time. Many employers are required by law to adjust your work schedule during cancer treatment.

When to get help right away

  • Call 911 or go to an emergency department if you feel faint, confused or short of breath alongside a fever. With blood counts low, an infection can move to sepsis quickly. Do not drive yourself.
  • Call the transplant team at once, at any hour, if your temperature hits 100.4°F (38°C) or higher, or you get hard shaking chills. CDC treats a fever after chemotherapy as a medical emergency. If you cannot reach them quickly, call 911 or go to an emergency room and tell staff on arrival that you have had a transplant. Do not drive yourself. Do not take any medicine for the fever before you talk with the team.
  • Call your care team right away, at any hour, if you have any of these: a cough or sore throat; a stiff neck; redness or swelling where your catheter enters the skin (CDC); white patches in your mouth; cloudy or bloody urine; or pain on passing urine. A stiff neck with fever or a bad headache means going to an emergency department.
  • Call your care team right away if a donor transplant brings a new rash, ongoing diarrhea, or yellowing of the eyes or skin. These can be signs of graft-versus-host disease, which can damage the skin, liver and intestines.

Sources

A microscope in the foreground with abstract cell overlays and a blurred laboratory team behind.

Common questions

What is a stem cell transplant?

A stem cell transplant is a procedure that restores blood-forming stem cells in people who have had theirs destroyed by the high doses of chemotherapy or radiation therapy used to treat certain cancers, blood disorders, and autoimmune disorders. It may also be called a bone marrow transplant or peripheral blood stem cell transplant.

How does a stem cell transplant fight cancer?

Stem cell transplants usually do not work against cancer directly. Instead, they restore your body's ability to produce new blood cells after very high-dose treatment used to destroy cancer cells. In leukemia, a donor transplant may also fight cancer directly through an effect called graft-versus-tumor.

What are the types of stem cell transplants?

Transplants can be autologous (the stem cells come from you), allogeneic (they come from someone else, such as a relative or matched donor), or syngeneic (they come from your identical twin). The stem cells can come from the bloodstream, the bone marrow, or umbilical cord blood.

What is graft-versus-host disease?

If you have an allogeneic (donor) transplant, you might develop graft-versus-host disease. This happens when white blood cells from your donor see cells in your body as foreign and attack them. It can damage the skin, liver, intestines, and other organs, and can be treated with steroids or other drugs.

How long does a stem cell transplant take?

A stem cell transplant can take a few months to complete. It begins with high-dose chemotherapy and maybe radiation for a week or two, followed by a few days of rest, then the stem cells are given on 'day zero.' Even after blood counts return to normal, immune recovery takes several months to 1 to 2 years.

How are donor stem cells matched to me?

Donor stem cells are tested for their HLAs (human leukocyte antigens), which are sets of protein markers on most cells in your body. The more HLAs you and the donor share, the better the chance your body will accept the donor's cells. Often the best match is a brother or sister.

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Prepared by Cancer Explained's AI-assisted editorial system

Written from National Cancer Institute material and compared with the source cited below.

Plain-language explanation of the published sources cited on this page. AI-assisted, source-checked, not clinician-reviewed.

Last updated: 2026-09-29Next planned review: 2027-01-02

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Cancer Explained does not originate medical claims. Every page restates guidance already published by the National Cancer Institute, the CDC, the USPSTF and the FDA, in plain language, with the source cited so you can check the original yourself. AI does the translating and organizing; automated checks test claims, citations, clarity and safety before anything publishes, and this is translation and navigation, not clinical judgment. Nothing here is personal medical advice, and no page can account for your particular situation.

Editorial status: Source checked — This page was written with AI assistance and then compared with the sources listed on it, looking for statements those sources do not back up. That check is not a sentence-by-sentence record and can miss errors. It is not a medical review, and it does not confirm the page is complete or right for your situation.

Human medical review: not completed. Pages here are not signed off by a clinician before they publish. That is not an oversight we are quietly working around: we restate published guidance and cite it, so the authority belongs to the source rather than to us, and every page names where its claims come from — you can verify us instead of trusting us. Where a volunteer clinician has reviewed a page, their name and credentials appear on it; where no name appears, no clinician has checked it. We are glad to have reviewers and are recruiting them, and we do not hold pages back waiting for one. Use this site to understand your situation and to ask better questions of the people treating you.

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