Skip to main content

Plain-language explanations based on National Cancer Institute resources · Educational only, not medical advice · How we verify

Cancer Explained

Understanding Your Pathology Report

A plain-language guide to what a surgical pathology report is, what information it contains, and how tissue is examined, based on National Cancer Institute resources.

Source: National Cancer Institute · NCI reviewed 2022-08-08 · Verified 2026-07-02

7 min readIntermediateUpdated 2026-07-02

The 30-second version

A pathology report is a medical report that describes a tissue sample taken from a patient, written by a pathologist. It provides the definitive cancer diagnosis and is used for staging and planning treatment. It usually includes a gross description, a microscopic description, and a final diagnosis.

Key takeaways

  • A pathology report describes a tissue sample and is written by a pathologist, a doctor who studies cells and tissues under a microscope.
  • The pathology report provides the definitive cancer diagnosis and helps with staging and treatment planning.
  • It usually includes a gross description, a microscopic description, a final diagnosis, and sometimes a comments section.
  • Margins are 'negative' (clean) when no cancer cells are found at the edge of removed tissue, and 'positive' (involved) when cancer cells are found there.
  • Molecular or biomarker test results may be part of the report and help identify the best treatments.
  • Your doctor will explain the report, and you can also ask for a second opinion from another pathologist.

Choose how you want to understand this

The full explanation.

The simple version

A pathology report (sometimes called a surgical pathology report) is a medical report that describes the characteristics of a tissue specimen taken from a patient. The report is written by a pathologist, a doctor who has special training in identifying diseases by studying cells and tissues under a microscope.

A pathology report includes identifying information (such as the patient's name, birthdate, and biopsy date) and details about where in the body the specimen is from and how it was obtained. It typically includes a gross description (a visual description of the specimen as seen by the naked eye), a microscopic description, and a final diagnosis. It may also include a section for comments by the pathologist.

The pathology report provides the definitive cancer diagnosis. It is also used for staging (describing the extent of cancer in the body, especially whether it has spread) and to help plan treatment.

Your pathology report is the document that confirms a cancer diagnosis and describes exactly what was found.

How tissue is obtained

The pathologist examines cells or tissues obtained during a biopsy or surgery, or from bodily fluids. A biopsy specimen can be obtained in several ways, such as by:

  • taking a tissue sample from the surface of the skin
  • using a needle inserted through the skin to withdraw tissue or fluid
  • inserting a thin, lighted tube called an endoscope through the mouth, anus, urethra, or a small incision to look inside the body and remove a sample

If surgery is used to remove part or all of a tumor, some or all of the removed tumor will be examined. When the entire tumor is removed, the surgeon typically tries to remove some normal tissue around it (the margin) so the pathologist can check that it doesn't contain tumor cells. For some cancers, especially breast cancer and melanoma, the surgeon may also remove nearby lymph nodes (the sentinel lymph nodes) so the pathologist can see if they contain cancer cells.

A pathologist may also examine cells in bodily fluids, such as urine, cerebrospinal fluid, sputum, and others.

How the tissue is examined

Tissue or cell specimens must be cut into very thin slices, called sections, so the pathologist can look at them under a microscope. The specimen must first be processed to make it solid.

The most common approach is to chemically "fix" the specimen, usually with a chemical called formalin. This stabilizes the cells. The tissue is then embedded into a permanent paraffin wax block, sliced into very thin sections, placed onto slides, and stained with dyes to help show parts of the cell and structures in the tissue. This is known as histologic (tissue) examination. Preparing these fixed sections normally takes several days, and the pathologist typically sends the report within 10 days after the biopsy or surgery.

Frozen sectioning is another approach, used when an immediate answer is needed—for example, during surgery to give the surgeon a rapid diagnosis while the patient is in the operating room. A frozen section can be examined in about 15 to 20 minutes. However, fixed (permanent) sections preserve more detail and are more commonly used to make a diagnosis.

The gross description

The gross description includes the color, weight, and size of a tissue sample as seen by the naked eye. It may also include the shape of the sample and any visible abnormalities. It indicates the body site the tissue was taken from, how many samples were taken, and whether and how many lymph nodes were removed.

The microscopic description

The microscopic description covers the appearance of the cells after they have been stained (often with hematoxylin and eosin, or H&E) and viewed under the microscope. It may include the type and number of cells seen, how abnormal the cells look (the tumor grade), and notable cell features.

This section also indicates whether abnormal cells are found in the margins or in lymph nodes:

  • Margins are described as negative (or "clean") when no cancer cells are found at the edge of the removed tissue, suggesting all the cancer has been removed. A margin is positive (or "involved") when cancer cells are found at the edge, suggesting some cancer has not been removed.
  • Lymph nodes are called positive if they have cancer cells and negative if they do not.

The microscopic description may also include results of additional tests, such as tests that measure properties of the cells or that look for genetic or molecular abnormalities.

The diagnosis

The diagnosis section is the pathologist's summary of all the findings from the visual and microscopic examination, combined with relevant clinical information. It is here that the cancer type is identified, including the tumor grade, lymph node status, margin status, and stage.

Molecular and biomarker results

Certain molecular tests, sometimes called biomarker tests, are done as part of the initial pathology analysis for all cases of a given cancer type. For example, a report for suspected breast cancer will include results of testing for estrogen and progesterone receptors and the protein HER2/neu. These results help identify the best treatments for an individual patient.

A liquid biopsy—testing a sample of blood or other fluid for pieces of tumor DNA—is another way molecular characteristics may be analyzed. Some of these results may appear in separate reports linked to the pathology report.

Getting your report and a second opinion

The doctor in charge of your treatment will tell you about the findings in the pathology report and can help you understand what it means for your situation. You can also ask to discuss your report with the pathologist. Be aware that report results often appear in the patient portal at the same time the doctor receives them, so you may see your report before your doctor has reviewed it.

Although the diagnosis of most cancers is straightforward, you or your doctor may want a second opinion from another pathologist. To do this, you will need to obtain the slides and/or paraffin block from the pathologist or hospital that examined the sample. Many institutions, including NCI-designated cancer centers, provide second opinions; contact the facility in advance about availability, cost, and shipping.

Your doctor is your guide to the report — and getting a second opinion is always an option if you want one.

Watch instead

Animated lessons are in production. Here’s the planned video slate for this topic — each one will be based on the same NCI-sourced explanation you’re reading.

60 seconds

Understanding Your Pathology Report: the quick overview

A one-breath explanation you can watch before an appointment.

Coming soon
3 minutes

Understanding Your Pathology Report, explained simply

The core ideas with friendly animation and plain language.

Coming soon
10 minutes

Understanding understanding your pathology report — full lesson

A deeper walkthrough covering the key takeaways and common questions.

Coming soon
Video transcript

A full, readable transcript will appear here when the video is published — so the lesson is accessible whether you prefer to watch, listen, or read. For now, the article above is the complete text version.

Suggested animation storyboard
  1. 1Open on a calm title card: "Understanding Your Pathology Report" with the Cancer Explained mark.
  2. 2Narrator reads the 30-second summary while a soft animated diagram builds on screen: "A pathology report is a medical report that describes a tissue sample taken from a patient, written by a pathologist. It provides the definitive cancer diagnosis and is used for staging and planning treatment. It usually includes a gross description, a microscopic description, and a final diagnosis."
  3. 3Scene 2: illustrate the idea — "A pathology report describes a tissue sample and is written by a pathologist, a doctor who studies cells and tissues under a microscope."
  4. 4Scene 3: illustrate the idea — "The pathology report provides the definitive cancer diagnosis and helps with staging and treatment planning."
  5. 5Scene 4: illustrate the idea — "It usually includes a gross description, a microscopic description, a final diagnosis, and sometimes a comments section."
  6. 6Close on a reminder card: this is educational only; talk with your healthcare team, and a link to the NCI source.

Words to know

Tap any term to see what it means.

Browse the full glossary →

Quick knowledge check

According to this article, who writes a pathology report?

Frequently asked questions

What is a pathology report?

A pathology report, sometimes called a surgical pathology report, is a medical report that describes the characteristics of a tissue specimen taken from a patient. It is written by a pathologist, a doctor with special training in identifying diseases by studying cells and tissues under a microscope. It provides the definitive cancer diagnosis and is used for staging and to help plan treatment.

What does a pathology report include?

A pathology report includes identifying information and details about where the specimen came from and how it was obtained. It typically includes a gross description (how the specimen looks to the naked eye), a microscopic description (how the cells look under the microscope), and a final diagnosis. It may also include a comments section from the pathologist.

What do 'positive' and 'negative' margins mean?

A margin is the edge of the tissue removed by surgery. A margin is described as negative (or 'clean') when the pathologist finds no cancer cells at the edge, suggesting all of the cancer has been removed. A margin is positive (or 'involved') when the pathologist finds cancer cells at the edge, suggesting some of the cancer has not been removed.

How long does it take to get a pathology report?

The pathologist typically sends a pathology report to the doctor within 10 days after the biopsy or surgery is performed. Preparing fixed (permanent) tissue sections normally takes several days. Frozen sections, used when an immediate answer is needed during surgery, can be done in about 15 to 20 minutes.

Will molecular or biomarker test results be in my report?

Sometimes. Certain molecular tests, sometimes called biomarker tests, are done as part of the initial pathology analysis for all cases of a given cancer type. For example, a report for suspected breast cancer will include results for estrogen and progesterone receptors and the protein HER2/neu. These results help identify the best treatments. Some results may appear in separate reports linked to the pathology report.

Can I get a second opinion on my pathology report?

Yes. Patients or their doctors may want to get a second opinion from another pathologist. To do this, you will need to obtain the slides and/or paraffin block from the pathologist or hospital that examined the sample. Many institutions, including NCI-designated cancer centers, provide second opinions; contact the facility in advance about availability, cost, and shipping.

Why might I see my pathology report before my doctor does?

Pathology report results will often appear in the patient portal at the same time the doctor receives them. This means you may see your report before your doctor has had a chance to review it and discuss it with you. The doctor in charge of your treatment will explain the findings and what they mean for your situation.

Test your understanding

A few quick questions to check what you took away. Not a test of anything medical — just a way to review.

0 of 4 answered

  1. Q1.According to this article, who writes a pathology report?
  2. Q2.According to this article, what does a 'negative' or 'clean' margin mean?
  3. Q3.According to this article, how quickly can a frozen section be examined?
  4. Q4.According to this article, what does the gross description of a specimen cover?

This quiz checks understanding of educational content only. It is not medical advice. Open this quiz on its own page.

Review key terms

Study 13 flashcards built from this topic’s key terms and common questions — flip each card to reveal a plain-language explanation.

Questions to ask your healthcare team

Consider bringing these questions to your next appointment.

  • Can you walk me through my pathology report section by section?
  • What is the diagnosis, and what type of cancer, if any, does it show?
  • Were my margins negative or positive, and what does that mean for me?
  • Were any lymph nodes involved?
  • Were any molecular or biomarker tests done, and what did they show?
  • Are any tests still pending?
  • How do I get a second opinion on my pathology results if I want one?

Related learning map

How this explanation connects to 15 other things you can explore — related topics, terms, questions, practice, and its NCI source.

Understanding Your Pathology Report